Integrating
$$ \mathbf{v}(t)=\mathbf{v}_{0}e^{-\xi t}+\int_{0}^{t}d\tau e^{-\xi (t-\tau )}\mathbf{F }(\tau ), $$we get
$$ \mathbf{r}(t)=\mathbf{r}_{0}+\mathbf{v}_{0}\frac{1}{\xi }(1-e^{-\xi t})+ \int_0^td\tau \int_0^{\tau}\tau ^{\prime } e^{-\xi (\tau -\tau ^{\prime })}\mathbf{F}(\tau ^{\prime }), $$from which we calculate the mean square displacement
$$ \langle ( \mathbf{r}(t)-\mathbf{r}_{0})^{2}\rangle _{\mathbf{v}_{0}}=\frac{v_0^2}{\xi}(1-e^{-\xi t})^{2}+\frac{3kT}{m\xi ^{2}}(2\xi t-3+4e^{-\xi t}-e^{-2\xi t}). $$