# Common imports
import os

# Where to save the figures and data files
DATA_ID = "Results/EnergyMin"

def data_path(dat_id):
    return os.path.join(DATA_ID, dat_id)

infile = open(data_path("Energies.dat"),'r')

from numpy import std, mean, concatenate, arange, loadtxt, zeros, ceil
from numpy.random import randint
from time import time


def tsboot(data,statistic,R,l):
    t = zeros(R); n = len(data); k = int(ceil(float(n)/l));
    inds = arange(n); t0 = time()
    
    # time series bootstrap
    for i in range(R):
        # construct bootstrap sample from
        # k chunks of data. The chunksize is l
        _data = concatenate([data[j:j+l] for j in randint(0,n-l,k)])[0:n];
        t[i] = statistic(_data)

    # analysis
    print ("Runtime: %g sec" % (time()-t0)); print ("Bootstrap Statistics :")
    print ("%8g %14g %15g" % (statistic(data), \
                             mean(t) - statistic(data), \
                             std(t) ))
    return t
# Read in data
X = loadtxt(infile)
# statistic to be estimated. Takes two args.
# arg1: the data
def stat(data):
    return mean(data)
t = tsboot(X, stat, 2**12, 2**10)

# Common imports
import os

# Where to save the figures and data files
DATA_ID = "Results/EnergyMin"

def data_path(dat_id):
    return os.path.join(DATA_ID, dat_id)

infile = open(data_path("Energies.dat"),'r')

from numpy import log2, zeros, mean, var, sum, loadtxt, arange, array, cumsum, dot, transpose, diagonal, sqrt
from numpy.linalg import inv

def block(x):
    # preliminaries
    n = len(x)
    d = int(log2(n))
    s, gamma = zeros(d), zeros(d)
    mu = mean(x)

    # estimate the auto-covariance and variances 
    # for each blocking transformation
    for i in arange(0,d):
        n = len(x)
        # estimate autocovariance of x
        gamma[i] = (n)**(-1)*sum( (x[0:(n-1)]-mu)*(x[1:n]-mu) )
        # estimate variance of x
        s[i] = var(x)
        # perform blocking transformation
        x = 0.5*(x[0::2] + x[1::2])
   
    # generate the test observator M_k from the theorem
    M = (cumsum( ((gamma/s)**2*2**arange(1,d+1)[::-1])[::-1] )  )[::-1]

    # we need a list of magic numbers
    q =array([6.634897,9.210340, 11.344867, 13.276704, 15.086272, 16.811894, 18.475307, 20.090235, 21.665994, 23.209251, 24.724970, 26.216967, 27.688250, 29.141238, 30.577914, 31.999927, 33.408664, 34.805306, 36.190869, 37.566235, 38.932173, 40.289360, 41.638398, 42.979820, 44.314105, 45.641683, 46.962942, 48.278236, 49.587884, 50.892181])

    # use magic to determine when we should have stopped blocking
    for k in arange(0,d):
        if(M[k] < q[k]):
            break
    if (k >= d-1):
        print("Warning: Use more data")
    return mu, s[k]/2**(d-k)


x = loadtxt(infile)
(mean, var) = block(x) 
std = sqrt(var)
import pandas as pd
from pandas import DataFrame
data ={'Mean':[mean], 'STDev':[std]}
frame = pd.DataFrame(data,index=['Values'])
print(frame)